Biopsy Sample Collection, Handling, and Processing (2024)

Biopsy Service

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  • Biopsy Sample Collection, Handling, and Processing
  • Standard Trimming Method
  • Processing of Special Tissue Submissions
  • Complete Surgical Margin Evaluation
  • Prognosis of Canine Cutaneous Mast Cell Tumors
    • Flowcharts to Support Therapeutic Decision-Making Based on Prognostic Parameters for Canine Cutaneous Mast Cell Tumors
  • Detecting c-Kit Mutations
  • Diagnosis and Prognosis of Canine Melanocytic Tumors
  • Differentiating Feline Intestinal Lymphoma from Inflammatory Bowel Disease (IBD)
  • PCR for Antigen Receptor Rearrangements (PARR)
  • Transmission Electron Microscopy
  • Ocular Pathology Service

The submission of a high-quality sample is a crucial component for a successful pathologic evaluation. In addition to the submission of well-preserved samples of high diagnostic quality, it is equally important to provide a thorough clinical history. In some cases, photographs of lesions are also helpful. Furthermore, close contact with the pathologist reading the biopsy sample is instrumental to a high-quality diagnosis and prognostic evaluation. At the MSU VDL, we strive to provide our clients with the highest quality service, and guarantee direct communication between our pathologists and our clients. We encourage our clients to talk to us on the phone, inquire about preparation of samples and additional testing available at the laboratory, and discuss diagnosis and clinical implications. The most important facts about sample submission are summarized here.

Specimen Fixation

Place tissue in fixative as soon as possible.

Preferred fixative is 10% neutral buffered formalin. Tissue to formalin ratio should be 1:10. If formalin is not available, the tissues should be refrigerated and shipped cold. Do not freeze.

Specimens should ideally be no thicker than 1 cm. However, for large specimens, we prefer that they are submitted intact (see below for tips for handling large specimens).

Fix tissues for 24-48 hours.

Tissues may also be fixed in formalin for 24-48 hours, removed from the solution, wrapped in formalin-soaked gauze sponges, and placed in a leak-proof plastic bag for shipment.

Please contact the laboratory for special fixation considerations (alternative fixatives; fixation of globes, nails, hooves, etc.).

To avoid freezing artifacts of the specimens when shipped in very cold weather, use an insulated shipping container, and/or substitute one part isopropyl alcohol in the formalin fixative.

If the size or density of the specimen requires incision in order to ensure complete fixation, care should be taken to incise the specimen at the surface (ie. haired skin surface in cutaneous masses) rather than at the deep/surgical margin.

If needed (e.g. the specimen is very large, full margin evaluation is desired, the specimen is oddly shaped), describe (or draw) any identifying characteristics of the specimen (i.e. ink, suture, staple, scar, etc.). This allows for communicating the orientation of the specimen between the clinician, histotechnician, and pathologist.

Very small specimens should be placed in a tissue cassette +/- foam pads to prevent specimen loss.

Specimen Information

Providing complete patient information will aid interpretation of lesions. This information will ideally include:

  • Patient signalment: species, breed, age, sex
  • Patient’s pertinent clinical history
  • Description, duration and distribution of lesion(s); photographs are always welcome
  • Previous biopsy information (accession number, copy of biopsy report, etc.)
  • Anatomic location of lesion
  • Description of identifying characteristics such as inked margins or suture placement for proper identification and/or orientation of the specimen
  • Number of tissues included in the submission

Biopsy specimens should be accompanied by the appropriate MSU VDL Biopsy submittal form.

Additional Specimen Types

Histologic slides or tissue in paraffin blocks may also be submitted to the laboratory for biopsy examination (consultation), immunohistochemistry, or special staining.

Our laboratory also offers GLP services for routine histology including evaluation by a pathologist and provides various types of special services (e.g. laser capture microdissection, in-situ hybridization, immunohistochemistry, electronmicroscopic preparation and evaluation, etc.) for researchers and pharmaceutical companies.

Shipping Biopsy Specimens

Formalin fixation of the tissue precludes the need for rapid transport of specimens to the diagnostic laboratory. However, in order to facilitate receiving biopsy results in a timely manner and to allow for ancillary testing such as immunohistochemistry (fixation in formalin should be less than two days), the use of an overnight carrier service is recommended.

Biopsy mailers are one of the Shipping Solutions offered by the MSU VDL. These mailers contain biopsy jars but NOT formalin, to safely and quickly ship your biopsy specimens to the MSU VDL. They are available as small (two biopsy jars) or large (four biopsy jars). Small biopsy mailers are available with overnight UPS delivery or USPS mail delivery; large biopsy mailers are available with overnight UPS delivery only.

Multiple Tissues or Tumors

Oncologic pathology has always been one of the mainstays of the biopsy service. To provide an accurate diagnosis and prognosis, we recommend that every surgically removed mass be submitted for pathologic examination. If an animal presents with multiple masses, each of these masses should be examined to guarantee an accurate diagnosis and prognosis.

To provide our clients with high quality, price competitive services, VDL will accept multiple biopsies that were taken at the same time from the same animal as a single case submission. There will only be a small additional charge for each additional tumor rather than a full biopsy charge. Please refer to our catalog of available tests for additional information regarding the submission of multiple tissue/tumor charges.

Please be sure to indicate the individual tumor site and lesion description where possible. If the tissue specimens are to be submitted in the same formalin container, identifying individual masses through the use of different colored inks, sutures, surgical staples, etc. is recommended. Multiple tissue charges do not apply to cases for which multiple skin biopsies are submitted for dermatologic conditions, or where multiple gastrointestinal biopsies are submitted from the same animal. For cases that include multiple other organs in the same submission, there will be an additional charge for a total of 4-5 tissues, followed by an additional charge for each 2-3 added tissues. For field necropsy cases that include both fixed and fresh tissue for diagnostic testing please see field necropsy information provided in our Necropsy Service.

Frozen Specimens

The histopathology service offers the preparation of frozen sections and our pathologists can perform microscopic evaluation of these sections. We have a state-of-the-art cryostat system with a tape-transfer system for higher quality sections. Frozen sections can be produced for research, but are also useful for fast turn-around and immunohistochemistry using antibodies that do not work in formalin-fixed sections (e.g. those used for histiocytic diseases). Commonly requested immunohistochemistry markers which require frozen tissue samples, rather than formalin-fixed tissue, include: CD4, CD8, CD11a, and CD11c.

Also see:

Preparation of Cytologic Samples for Immunocytochemistry

Standard Trimming Method

Complete Surgical Margin Evaluation (includes instructions for inking margins)

Submitting Special Tissues (e.g. bone, bone marrow, tooth, nail, hoof, eye)

Biopsy Sample Collection, Handling, and Processing (2024)

FAQs

What is biopsy processing? ›

The biopsy tissue is put into small containers called cassettes, which hold the tissue securely while it's processed. After processing (which is usually done overnight), the tissue sample is put into a mold with hot paraffin wax. The wax cools to form a solid block that protects the tissue.

How are biopsy samples collected? ›

During fine-needle aspiration, a long, thin needle is inserted into the suspicious area. A syringe is used to draw out fluid and cells for analysis. Core needle biopsy. A larger needle with a cutting tip is used during core needle biopsy to draw a column of tissue out of a suspicious area.

What is a normal biopsy report? ›

A biopsy report describes the findings of the specimen. Most reports contain the following information: Identification and clinical information. This information includes your name, medical record number, date of the procedure, and the unique identifier of the specimen.

Does an inconclusive biopsy mean no cancer? ›

A biopsy is sometimes inconclusive, which means it hasn't produced a definitive result. In this case, the biopsy may need to be repeated, or other tests may be required to confirm your diagnosis.

How long does biopsy processing take? ›

Results from a biopsy are usually returned with 24 to 48 hours. Special biopsies performed during surgical procedures may take as little as 10 to 15 minutes. Depending on the type of biopsy, you may need to make a follow-up appointment with your doctor to discuss the results. Treatment depends on the diagnosis.

How to interpret biopsy results? ›

A tumor with cells that look more like healthy cells is called "low grade" or "well differentiated." A tumor with cells that look less like healthy cells is called "high grade," "poorly differentiated," or "undifferentiated." In general, the lower the tumor's grade, the better the prognosis.

What is the difference between biopsy and sample? ›

A biopsy removes a small amount of tissue or an entire tumour. Imaging techniques such as ultrasound or a CT scan may be used to identify the area to be biopsied. Samples of tissue can be removed with a special needle, a brush, a scalpel or other instrument.

What is the difference between a biopsy and a specimen? ›

The tissue sample removed during a biopsy is called a specimen. The medical staff who perform your biopsy place the specimen in a container with a fluid to preserve it.

Is biopsy a painful process? ›

The removal of tissue or cells for analysis is called a biopsy. While a biopsy may sound scary, it's important to remember that most are entirely pain-free and low-risk procedures. Depending on your situation, a piece of skin, tissue, organ, or suspected tumor will be surgically removed and sent to a lab for testing.

What happens if a biopsy report is positive? ›

At the most basic level, these test results are expected to be one of two kinds: positive, meaning the condition (or cancer) being sought – or an abnormality – is present; or negative, meaning the condition has not been detected. Biopsies provide much more information than just the presence or lack of cancerous cells.

What diseases can a biopsy show? ›

Biopsies can often help diagnose or rule out:
  • cancer.
  • peptic ulcers – ulcers affecting the digestive system.
  • hepatitis – inflammation of the liver.
  • kidney disease.
  • endometriosis – where cells that usually line the womb are found elsewhere in the body.
  • specific infections.

Is biopsy 100% accurate? ›

Biopsies are a very accurate way to detect abnormal cells or other changes in your body that may be signs of issues. That said, studies suggest false-negative results do happen. A false-negative result means you have cancer or another illness that a biopsy didn't detect.

Do biopsy results take longer if it's cancer? ›

Is It Bad News if Biopsy Results Take Longer? The timeline for receiving biopsy results does not inherently signify the severity of the diagnosis. While swift results are often desirable, various factors can contribute to longer waiting periods.

Do they only do a biopsy if they suspect cancer? ›

Certain things about the image might even suggest that it's likely to be cancerous. But there are many benign (noncancerous) tumors that look very much like cancerous growths. That's why, if your doctor suspects cancer from imaging, they will almost always follow up with a biopsy.

Can they tell what stage cancer is in by biopsy? ›

Needle biopsies are commonly used to remove a small sample of cells or tissue from the area of concern. If the cancer can't be diagnosed from a tissue sample, you may have surgery to remove the mass so it can be checked for signs of cancer. The biopsy results are used to diagnose and stage cancer.

How long does it take to recover from a biopsy? ›

Tenderness should go away in about a week, and the bruising will fade within two weeks. Firmness and swelling may last 6 to 8 weeks. Your incision may have been closed with strips of tape or stitches. If you have strips of tape on the incision, leave the tape on for a week or until it falls off.

Is biopsy very painful? ›

Needle biopsy carries a small risk of bleeding and infection at the site where the needle was inserted. Some mild pain can be expected after needle biopsy, though it is usually controlled with over-the-counter pain relievers.

How are skin biopsies processed? ›

Initially, the cassettes are placed into a fixative. Paraffin blocks are then prepared to allow the tissue to be cut into thin microscopic sections (3-5 microns). Using an automated processor, the water is removed from the tissue by alcohol dehydration.

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